CDS

Accession Number TCMCG007C50782
gbkey CDS
Protein Id XP_009144452.1
Location join(21442876..21443253,21443334..21443486,21443559..21443690,21443777..21443935,21444678..21444770,21445051..21445167,21445337..21445411,21445497..21445714,21445821..21446739)
Gene LOC103868103
GeneID 103868103
Organism Brassica rapa

Protein

Length 747aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009146204.3
Definition zinc finger CCCH domain-containing protein 5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description Zinc finger C-x8-C-x5-C-x3-H type (and similar)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
KEGG_ko ko:K08819        [VIEW IN KEGG]
EC 2.7.11.22        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.7.11.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCCGCAGAACGAAAAGCCGGAAGAAGGAGGGCGTCTCGAGGAAGCGATGGGAGGGTTGGAAGAGAGTAAAGACAAATCAGCGGAGATGAGCCGTAAGGAGAAGCGAAAAGCGATGAAGAAATTGAAGAGGAAGCAGGTGAGGAAGGAGATAGCGTCCAAAGAGAGAGAAGATGCGGAAGCCAAGTTAAACGATCCGGCGGAGCAGGAGAAGCTGAAGGCGATCGAGGAAGAGGAGGCGCGGAAGAGAGAGAAGGAGCTGAGAGAGTTCGAGGAGAGTGAGAGAGCTTGGAGAGAGGCTATGGAGATTAAGAGGAAGAAAGAGGAAGAGGAAGAGAGGCGTTGGAAGGAGATAGAGGAGTTGAGAAAGCTTGAGGCTAGTAGGGATGGTGAATGTGGTGAGGATGGTGAGTATGAGTATATAGAAGAAGGGCCTCCAGAGATTATATTCAAGGGTAATGAGATTATTCTCAGAAAGAACAAAGTGAGAGTTCCAAAAAAATCAGTACCTCAGGTGGAAGGAAATGAGATTGCTGACAGGCCTACATCGAATCCTCTACCTCCGGGAACTGAAGCTTTGTCAAAGTATCATAATGTTAGCTCTGCTCAGCAGATTCTGGATAGTGTTGCACAGGAAGTACCCAACTTTGGAACTGAGCAGGATAAAGCTCATTGTCCTTTCCATTTAAAGACTGGAGCTTGTCGATTTGGCCCGCGTTGCAGCAGAGTTCATTTCTACCCTGATAAGTCGTGCACTATACTTATGAAGAACATGTATAATGGTCCTGGCATTGCTTGGGAACAGGATGAGGGGCTTGAGTATACAGATGAAGAAGCTGAACACTGTTACGAAGAATTTTATGAAGATGTTCATACGGAGTTCCTGAAGTATGGAGAACTGATTAATTTCAAGGTATGTAGAAATGGCTCATTCCACTTGAAGGGCAATGTGTATGTACACTACAGATCATTGGAATCAGCTATGCTTGCCTACCAATCCATAAATGGTCGATATTTCGCTGGTAAACAGGTGAACTGCGAATTTGTCAACATCTCAAGATGGAAAGTCGCCATATGTGGGGAGTACATGAAGTCTAGGCTTAAAACTTGCTCTCGTGGATCTTCGTGCAACTTTATCCATTGTTTCCGAAACCCTGGTGGAGACTATGAATGGGCTGACTATGACAAACCACCTCCTAGATTCTGGATTCGCAAAATGACCTCTTTATTTGGTTACTCAGATGAATACTTGAAGCACATGGAGCGTGAGTATTCAGGGTCGTTGAGTGAGTTTAGATCAGATCAACCAACAGATTTACAGAGGCAACCTTCAAGAAGATCTAGATCGAGGGACCATGATCATGTGAACGTTGGATCTAAACCTTCTTATAGGAGCCGTACTCGGGACAGTTCTCGTGGACACAAACATAGTAGGCATGAAGAGAACTGTCATGGTGGAGATGAAAGTCCTAGCAGTACTAGAGACGGTAGTGTAGAGAGAGAGACTTATAAAGAGCCACGGTATGCTAAAGAGACATCACGTCACGAAAGCAAATGGTCTGAACACTCTCCTAGACATCGAGTGATGAGGAAAAGAATCTATGAGAAGTATTCCGATGATGATTCAGGAGTTGAAGATGGCAGGGGAGAGACTTCTCACAAACGGAAAAGCTCAAGGCGTTATGGCAAACGAGGCTCAGATTCAGAAGTTCAAGAAGGGCTGGACGATGAAGAGAACACGAGAACCCATTGGTCTAGTTCTGACAGGAGATCAAGAAAAGAAGATGATAGGGAAGGATCATCAGCTGATCATAAGGAGAAGAGTCATGGACATGATAGGGTTCATGAAGTTGGTGAGAAGTCGCGGAGGGAAAGAAGCAGCTCAAGATATTCGCACGAGGGAGACTCAAGTGAAAGTAAACATCGTCCCCATAAAGGATCAGGAGAAAATGAGAGGAAAAGAAGTGTGGAGACTAGTCCACGAGATAAAGATAGGGACAAGAGCAAGGAGAGACATAGATACAACAAGACCGGAGATCCTGATTCTGATCGAAGCAGGAAAGGTAAACAAGGCCGAGAATCGCAAGAAGTCAAGCGGAATGCAAGTGGTTCATCAAGTGATGAAGAGAGAGAAGAAAGACGCAAAGAGAGATCTCATAGTAGCCATAGGAAACGAAGAAGATCAGACGAGCAGACTCGTAAGGAACCAGAGGAGGAGATTGAGCGTTGGAGACCAATGTGA
Protein:  
MEPQNEKPEEGGRLEEAMGGLEESKDKSAEMSRKEKRKAMKKLKRKQVRKEIASKEREDAEAKLNDPAEQEKLKAIEEEEARKREKELREFEESERAWREAMEIKRKKEEEEERRWKEIEELRKLEASRDGECGEDGEYEYIEEGPPEIIFKGNEIILRKNKVRVPKKSVPQVEGNEIADRPTSNPLPPGTEALSKYHNVSSAQQILDSVAQEVPNFGTEQDKAHCPFHLKTGACRFGPRCSRVHFYPDKSCTILMKNMYNGPGIAWEQDEGLEYTDEEAEHCYEEFYEDVHTEFLKYGELINFKVCRNGSFHLKGNVYVHYRSLESAMLAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSSCNFIHCFRNPGGDYEWADYDKPPPRFWIRKMTSLFGYSDEYLKHMEREYSGSLSEFRSDQPTDLQRQPSRRSRSRDHDHVNVGSKPSYRSRTRDSSRGHKHSRHEENCHGGDESPSSTRDGSVERETYKEPRYAKETSRHESKWSEHSPRHRVMRKRIYEKYSDDDSGVEDGRGETSHKRKSSRRYGKRGSDSEVQEGLDDEENTRTHWSSSDRRSRKEDDREGSSADHKEKSHGHDRVHEVGEKSRRERSSSRYSHEGDSSESKHRPHKGSGENERKRSVETSPRDKDRDKSKERHRYNKTGDPDSDRSRKGKQGRESQEVKRNASGSSSDEEREERRKERSHSSHRKRRRSDEQTRKEPEEEIERWRPM